Publications

2021

Journal articles

The impact of Neurofeedback on effective connectivity networks in chronic stroke patients: an exploratory study, Giulia Lioi, Adolfo Veliz, Julie Coloigner, Quentin Duché, Simon Butet, Mathis Fleury, Emilie Leveque-Le Bars, Elise Bannier, Anatole Lecuyer, Christian Barillot, Isabelle Bonanarticle, Journal of Neural Engineering, IOP Publishing, 2021, 18 (5), pp.056052. ⟨10.1088/1741-2552/ac291e⟩ https://hal-imt-atlantique.archives-ouvertes.fr/hal-03354296/file/paper_DCM_stroke_review.pdf

Quantitative perfusion mapping with induced transient hypoxia using BOLD MRI. Chau Vu, Yaqiong Chai, Julie Coloigner, Aart Nederveen, Matthew Borzage, Adam Bush, John Wood. Magnetic Resonance in Medicine, Wiley, 2021, 85 (1), pp.168-181. ⟨10.1002/mrm.28422⟩ https://www.hal.inserm.fr/inserm-02913689/file/dDSC_R2_ver1_clean.pdf

Conference papers

Structural and functional interplay in anxiety related classification: a graph signal processing approachGiovanna Orrù, Pierre Maurel, Julie ColoignerISBI 2021 – IEEE International Symposium on Biomedical Imaging, Apr 2021, Nice, France. pp.1-4, https://hal.inria.fr/hal-03450470/file/ISBI_2021_Orru.pdf

2020

Journal articles

Structural abnormalities associated with poor outcome of a major depressive episode: the role of thalamus. Jean-Marie Batail, Julie Coloigner, Marine Soulas, Gabriel Robert, Christian Barillot, Dominique Drapier. Psychiatry Research: Neuroimaging, Elsevier, 2020, 305, pp.1-10. ⟨10.1016/j.pscychresns.2020.111158⟩

Transient Hypoxia Model Revealed Cerebrovascular Impairment in Anemia Using BOLD MRI and Near‐Infrared Spectroscopy Julie Coloigner, Chau Vu, Matthew Borzage, Adam Bush, Soyoung Choi, Xin Miao, Yaqiong Chai, Cristina Galarza, Natasha Leporé, Benita Tamrazi, Thomas Coates, John Wood. Journal of Magnetic Resonance Imaging, Wiley-Blackwell, 2020, 52 (5), pp.1400-1412. ⟨10.1002/jmri.27210⟩

2019

Journal articles

White matter has impaired resting oxygen delivery in sickle cell patients. Yaqiong Chai, Adam Bush, Julie Coloigner, Aart Nederveen, Benita Tamrazi, Chau Vu, Soyoung Choi, Thomas Coates, Natasha Leporé, John Wood. American Journal of Hematology, Wiley, 2019, 94 (4), pp.467-474. ⟨10.1002/ajh.25423⟩

White matter abnormalities in depression: a categorical and phenotypic diffusion MRI study. Julie Coloigner, Jean-Marie Batail, Olivier Commowick, Isabelle Corouge, Gabriel Robert, Christian Barillot, Dominique Drapier. Neuroimage-Clinical, Elsevier, 2019, 22, pp.101710. ⟨10.1016/j.nicl.2019.101710⟩

Patients with sickle-cell disease exhibit greater functional connectivity and centrality in the locus coeruleus compared to anemic controls. Ravi Bhatt, Lonnie Zeltzer, Julie Coloigner, John Wood, Tom Coates, Jennifer Labus. Neuroimage-Clinical, Elsevier, 2019, 21, pp.101686. ⟨10.1016/j.nicl.2019.101686⟩

Conference papers

Structural connectivity analysis in treatment-resistant depression. Julie Coloigner, Jean-Marie Batail, Dominique Drapier, Christian Barillot. OHBM 2019 – 25th Annual Meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy. pp.1-2

Hyperoxia Challenge in Healthy and Anemic Subjects using BOLD MRI. Chau Vu, Julie Coloigner, John Wood. ISMRM, May 2019, Montreal, France

Effect of prenatal organic solvent exposure on structural connectivity at childhood. Julie Coloigner, Anne-Claire Binter, Elise Bannier, Jean-Christophe Ferré, Cécile Chevrier, Christian Barillot, Fabienne Pelé. ISBI 2019 – 16th IEEE International Symposium on Biomedical Imaging, Apr 2019, Venise, Italy. pp.151-154, ⟨10.1109/ISBI.2019.8759473⟩

2018

Conference papers

Diffusion MRI as an imaging marker of depression from a large and homogenous population study. Julie Coloigner, Jean-Marie Batail, Isabelle Corouge, Jean-Christophe Ferré, Dominique Drapier, Christian Barillot. ISMRM 2018 – International Society for Magnetic Resonance in Medicine, Jun 2018, Paris, France. pp.1-2

Diffusion MRI as a descriptive imaging marker of the pathogenesis of treatment-resistant depression. Julie Coloigner, Jean-Marie Batail, Isabelle Corouge, Jean-Christophe Ferré, Dominique Drapier, Christian Barillot. ISMRM 2018 – International Society for Magnetic Resonance in Medicine, Jun 2018, Paris, France. pp.1-2

Poster communications

White matter connectivity analysis in patients suffering from depression. Julie Coloigner, Jean-Marie Batail, Isabelle Corouge, Dominique Drapier, Christian Barillot. 2018 – 7ème Forum de l’Institut de Psychiatrie, Sep 2018, Amiens, France. pp.1

2017

Journal articles

Contrasting resting-state fMRI abnormalities from sickle and non-sickle anemia. Julie Coloigner, Yeun Kim, Adam Bush, Soyoung Choi, Melissa Balderrama, Thomas Coates, Sharon O’Neil, Natasha Leporé, John Wood. PLoS ONE, Public Library of Science, 2017, 12 (10), pp.e0184860. ⟨10.1371/journal.pone.0184860⟩

Graph Lasso-based test for evaluating functional brain connectivity in sickle cell disease. Julie Coloigner, Ronald Phlypo, Thomas D. Coates, Nastasha Lepore, John C Wood. Brain connectivity, Mary Ann Liebert, Inc. publishers, 2017, 7 (7), ⟨10.1089/brain.2016.0474⟩

Conference papers

Fiber connection density based on in sickle cell disease. Julie Coloigner, Jacob Anthony, Rosa Vlosova, Adam Bush, Soyoung Choi, Maxime Descoteaux, Jean Christophe Houde, Thomas D. Coates, Natasha Lepore, John Wood. 25th annual meeting of the international society of magnetic resonance in medecine, 2017, Honolulu, Hawaii, United States

Parametric Mapping of Oxygen Activity in Human Placenta across Gestation using in utero BOLD imaging. Vidya Rajagopalan, Vince Schmithorst, Julie Coloigner, Jessica Winowski, Matthew Borzage, Hollie Lai, Skorn Ponrartana, Ashok Panigrahy, Stefan Bluml. 25th annual meeting of the international society of magnetic resonance in medecine, 2017, Honolulu, United States

2016

Conference papers

An experimental investigation of labeling efficiency for pseudo-continuous arterial spin labeling. Yaqiong Chai, Adam Bush, Julie Coloigner, Xiaoping Qu, Jonathan Chia, Natasha Leporé, John Wood. 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI 2016), Apr 2016, Prague, France. ⟨10.1109/ISBI.2016.7493458⟩

Functional connectivity analysis for thalassemia disease based on a graphical lasso model. Julie Coloigner, Ronald Phlypo, Adam Bush, Natasha Lepore, John Wood. ISBI 2016 – IEEE International Symposium on Biomedical Imaging, Apr 2016, Prague, Czech Republic. pp.1295 – 1298, ⟨10.1109/ISBI.2016.7493504⟩

BOLD delay times using group delay in sickle cell disease. Julie Coloigner, Chau Vu, Adam Bush, Matt Borzage, Vidya Rajagopalan, Natasha Leporé, John Wood. SPIE Medical Imaging, Feb 2016, San Diego, United States. ⟨10.1117/12.2217263⟩

The 3D EdgeRunner Pipeline: a novel shape-based analysis for neoplasms characterization. Fernando Yepes-C, Rebecca Johnson, Yi Lao, Darryl Hwang, Julie Coloigner, Felix Yap, Desai Bushan, Phillip Cheng, Inderbir Gill, Vinay Duddalwar, Natasha Leporé. SPIE Medical Imaging 2016, Feb 2016, San Diego, CA, United States. ⟨10.1117/12.2217238⟩

DTI analysis in patients with sickle cell disease. Julie Coloigner, Daniela Sacchetto, Jeff Tanedo, Maxime Descoteaux, Thomas D. Coates, Jean Christophe Houde, Natasha Lepore, John Wood. 46th Society For Neuroscience conference, 2016, San Diego, United States

2015

Journal articles

A novel classification method for prediction of rectal bleeding in prostate cancer radiotherapy based on a semi-nonnegative ICA of 3D planned dose distributions. Julie Coloigner, Aureline Fargeas, Amar Kachenoura, Lu Wang, Gael Dréan, Caroline Lafond, Lotfi Senhadji, Renaud de Crevoisier, Oscar Acosta, Laurent Albera. IEEE Journal of Biomedical and Health Informatics, Institute of Electrical and Electronics Engineers, 2015, 9 (3), pp.1168-1177. ⟨10.1109/JBHI.2014.2328315⟩

On feature extraction and classification in prostate cancer radiotherapy using tensor decompositions. Auréline Fargeas, Laurent Albera, Amar Kachenoura, Gaël Dréan, Juan-David Ospina, Julie Coloigner, Caroline Lafond, Jean-Bernard Delobel, Renaud de Crevoisier, Oscar Acosta. Medical Engineering and Physics, Elsevier, 2015, 37 (1), pp.126-31. ⟨10.1016/j.medengphy.2014.08.009⟩

Conference papers

Tract specific analysis in patients with sickle cell disease. Yaqiong Chai, Julie Coloigner, Xiaoping Qu, Soyoung Choi, Adam Bush, Matt Borzage, Chau Vu, John Wood, Natasha Lepore. 11th International Symposium on Medical Information Processing and Analysis (SIPAIM 2015), Nov 2015, Cuenca, France. ⟨10.1117/12.2213617⟩

Analysis of Hemodynamic Changes and Bold Signals of Sickle Cell Disease Patients during Desaturation. Julie Coloigner, Chau Vu, Matt Borzage, Adam Bush, Natasha Lepore, Thomas D. Coates, John Wood. 57th American Society of Hematology (ASH) conference, 2015, Orlando, United States

Low-frequency fluctuation amplitude analysis of resting-state fMRI for sickle cell disease patients. Julie Coloigner, Yeun Kim, Adam Bush, Matt Borzage, Vidya Rajagopalan, Natasha Lepore, John Wood. 11th International Symposium on Medical Information Processing and Analysis, 2015, Cuenca-Ecuador, Ecuador

Poster communications

Diffuse T1-MRI White Matter Volume Decrease in Patients with Sickle Cell Disease. Soyoung Choi, Adam Bush, Matt Borzage, Anand Joshi, Vidya Rajagopalan, Julie Coloigner, Natasha Lepore, Thomas D. Coates, John Wood. 21sy Annual meeting of the Organization for Human Brain Mapping, Apr 2015, Honolulu, HI, United States

2014

Journal articles

Line search and trust region strategies for canonical decomposition of semi-nonnegative semi-symmetric 3rd order tensors. Julie Coloigner, Ahmad Karfoul, Laurent Albera, Pierre Comon article Linear Algebra and its Applications, Elsevier, 2014, 450, pp.334-374. ⟨10.1016/j.laa.2014.02.001⟩

Semi-nonnegative joint diagonalization by congruence and semi-nonnegative ICA. Julie Coloigner, Laurent Albera, Amar Kachenoura, Fanny Noury, Lotfi Senhadji. Signal Processing, Elsevier, 2014, 105, pp.185-197. ⟨10.1016/j.sigpro.2014.05.017⟩

2011

Conference papers

Canonical decomposition of semi-symmetric semi-nonnegative three-way arrays . Julie Coloigner, Laurent Albera, Amar Kachenoura, Lotfi Senhadji. Signals, Systems and Computers (ASILOMAR), Nov 2011, Pacific Grove, CA, United States. pp.444 – 448, ⟨10.1109/ACSSC.2011.6190038⟩

Décomposition de tableaux d’ordre trois semi-nonnégatifs et semi-symétriques. Julie Coloigner, Laurent Albera, Ahmad Karfoul, Pierre Comon. GRETSI 11, Vingt-troisième colloque sur le Traitement du Signal et des Images, Sep 2011, Bordeaux, France. pp.4

2010

Conference papers

Semi-nonnegative Independent Component Analysis: The (3,4)-SENICAexp Method. Julie Coloigner, Laurent Albera, Ahmad Karfoul, Amar Kachenoura, Pierre Comon, Lotfi Senhadji. Proceedings of the 9th International Conference Latent Variable Analysis and Signal Separation LVA/ICA 2010, Sep 2010, St. Malo, France. pp.612-619, ⟨10.1007/978-3-642-15995-4_76⟩